Season
- Season 2 2006-04-10
- Season 1 2004-10-11
- Season 0 2006-07-17
Episode
- Episode 1: The Order of Operations / The Missing Needle
- Episode 2: The Ant's Legs
- Episode 3: Playing Doctor
- Episode 4: The Sixth-Magnitude Man
- Episode 5: A Teacher and a Pupil
- Episode 6: White Lion
- Episode 7: The Miracle Arm
- Episode 8: Moraimizu
- Episode 9: Legend of the Phoenix
- Episode 10: The Gift from a Killer Whale
- Episode 11: Give My Brother Back!
- Episode 12: A Pirate's Arm
- Episode 13: Move, Solomon
- Episode 14: The Fabricated Wedding
- Episode 15: Missing Pinoko
- Episode 16: The Idol Who Lost Her Voice
- Episode 17: Mail Friends
- Episode 18: Good Luck, Kowa Clinic
- Episode 19: The Sage of Yamate Line
- Episode 20: First Storm of Spring
- Episode 21: Pinoko's Plans for Adulthood
- Episode 22: Love after the Downpour
- Episode 23: A Challenge called Avalanche
- Episode 24: Cholera Uproar
- Episode 25: Abacus Genius
- Episode 26: Tragedy of an Ultra-fine Room
- Episode 27: Wilderness Epidemic
- Episode 28: The Life-Arranging Flower
- Episode 29: Operation in the Midst of Thunder Clouds
- Episode 30: 20th Year Implication
- Episode 31: The Blue Sea's Fear
- Episode 32: Invader from the Sky
- Episode 33: Shaking Operating Room
- Episode 34: Jack Hospital
- Episode 35: Misaki's House is Incomplete
- Episode 36: Iruka and Gang
- Episode 37: Challenge to an Unknown Person
- Episode 38: War Will Continue
- Episode 39: Doll and Policeman
- Episode 40: Operation and A Movie's Miracle
- Episode 41: Life's Misdiagnosis
- Episode 42: Shrink!
- Episode 43: Pinoko's Birth
- Episode 44: Merry Drinker's Classmates
- Episode 45: Cultural Festival Bodyguard
- Episode 46: Snow Field's Violin
- Episode 47: Robin Boy
- Episode 48: The Carbuncle (The Face Affliction)
- Episode 49: Brotherly Love
- Episode 50: The Blind Doctor of Acupuncture
- Episode 51: Eyewitness
- Episode 52: Infant's Balad
- Episode 53: The Fortunes and Misfortunes of the Deceitful Parent and Child
- Episode 54: The Platform of Life
- Episode 55: The Skin Donor
- Episode 56: Pinoko's Exam Diary
- Episode 57: The Old Man and the Big Tree
- Episode 58: Black Queen
- Episode 59: The Encounter Between the Two with a Past
- Episode 60: The Two Pinokos
Black Jack Black Jack Abacus Genius
Black Jack is an "unregistered" doctor with a clouded, mysterious past. He works with his little assistant Pinoko (who has a massive crush on the doctor), dealing with medical cases not very well known, which can be strange, dangerous, or not known at all. But he is a genius, and can save almost any of his patients' life (as long as they have the money for it, that is), and is known to many around the world, especially to those of medicine and science. He's a man of science himself, and does not believe much until he has seen it, yet it is many times he is surprised by love and nature often overpowering the science he bases his life in.
